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Differences Between Purines and Pyrimidines in DNA and RNA

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What Is the Difference Between Purines and Pyrimidines in Structure and Function

The nucleotide bases in DNA and RNA include nitrogenous bases in the form of purines and pyrimidines. Purine bases are adenine and guanine having two carbon-nitrogen rings. On the other hand, pyrimidine bases such as cytosine and thymine have one carbon-nitrogen ring.  

 

Structure of Purine and Pyrimidine 

1. Purine 

The structure of purine is largely heterocyclic with the aromatic compound comprising four nitrogen atoms. Two carbon rings are also present. These rings are made up of a fusion of imidazole rings and pyrimidine. 

 

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2. Pyrimidine 

Pyrimidine is heterocyclic in nature with the aromatic compound only consisting of one carbon ring and two nitrogen atoms. 

 

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This inherent structure of the bases leads to purine and pyrimidine differences. 

 

Nucleobases 

Purine composes two out of four nucleobases both in deoxyribonucleic acid (DNA) and ribonucleic acid (RNA) –

  • Adenine 

  • Guanine 

 

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Pyrimidines consist of the remaining bases in DNA and RNA –

  • Uracil 

  • Cytosine 

  • Thymine 

 

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Function of Purine and Pyrimidine Bases 

1. Purine Catabolism 

Owing to the end-product of purine catabolism being uric acid, it has a significant role to play in our body. The urate oxidase enzyme is not present in the human body, and from uric acid, urate is created. The formation of uric acid takes place in the liver and is subsequently discharged with urine through the kidney.

 

In the human body, monosodium salt and un-dissociated uric acid are the least soluble. Such nature usually does not cause any problem in the human body unless urine has a very high acidic content. The concentration of urate eventually causes the development of gout. 

 

2. Pyrimidine Catabolism 

Pyrimidine catabolism leads to the end-product of carbon dioxide, ammonia and beta-amino acids. The beta-amino acid is mostly excreted, otherwise it is incorporated into muscle dipeptides.

 

Purine vs Pyrimidine 

The Differences between Purine and Pyrimidine are the following -

Parameters

Purines

Pyrimidines

Source 

Adenine and guanine within DNA and RNA.

Thymine in DNA, Uracil in RNA only, Cytosine in RNA and DNA both.

Size 

Purines are bigger in size. 

Pyrimidines are smaller in size.

Structure 

Purines have one pentose and one hexose ring. 

Pyrimidines have one hexo-cyclic ring. 

Chemical formula 

Chemical formula of purine – C5H4N4

Chemical formula of pyrimidine – C4H4N2

Solubility 

Purines are soluble in water.

Pyrimidines are insoluble in water.

Catabolic end product 

Purine catabolic end product – uric acid. 

Pyrimidine catabolic end product – carbon dioxide, beta-amino acids and ammonia. 

Melting point 

Purine has a higher melting point: 214\[^{\circ}C\]

Pyrimidine has a lower melting point: 22\[^{\circ}C\]

Molecular mass 

Molecular mass of purine is 120.115g/mol

Molecular mass of pyrimidine is 80.08 g/mol

Location of biosynthesis 

Biosynthesis takes place in the liver. 

Biosynthesis takes place in different tissues. 


Bonding between Purines and Pyrimidines

Purines pyrimidines are two distinct nitrogenous nucleotide bases. They form the five nucleobases presenting DNA and RNA. Pyrimidine bases are basically heterocyclic compounds that consist of a single carbon ring having two nitrogen atoms and purine bases consist of two carbon things with a greater number of nitrogen atoms. Purines always bond with pyrimidines via hydrogen bond and each bond follows Watson Crick base-pairing rules.


Presence in DNA and RNA

Purines and pyrimidines are heterocyclic aromatic compounds having two and three molecules respectively. They serve as a major component in the production of DNA and RNA. Also, they are useful for the energy production of cells. 


In DNA: 

DNA is a material that carries information about how any living being will look and function. The major backbone of the production of DNA is the presence of purines and pyrimidines. Purine has two types: adenine and guanine. Pyrimidines have three cytosine uracil and thymine. But In DNA only four types of nitrogen bases are used which are adenine, guanine, cytosine and thymine. Adenine pairs with thymine via two hydrogen bonds whereas guanine pairs with cytosine via 3 hydrogen bonds. 


In RNA: 

RNA is an important molecule found in the blood cells and it is necessary for living beings. The major backbone of the production of RNA is purines and pyrimidines. Purine has two types and pyrimidine has three types of molecules. But in RNA only four types of molecules are present. RNA is produced with nitrogen bases as adenine, guanine, cytosine and uracil. The difference between them is that they contain sugar fibres whereas DNA contains the different sugar deoxyribose.


Now that you have a basic understanding of the bases as well as the difference between pyrimidine and purine, challenge yourself by solving the following! 

 

Test Yourself 

1. Which of the following are nucleotides?

(a) Nitrogen bases + Pentose sugar + Phosphate 

(b) Nitrogen bases + Pentose sugar

(c) Purine bases 

(d) None of the above

 

2. _____ is a purine base. 

(a) Uracil 

(b) Thymine 

(c) Cytosine 

(d) Adenosine

 

Solutions:

1.(a) Nitrogen bases + Pentose sugar + Phosphate 

2.(d) Adenosine


Did You Know?

The identification of pyrimidine compounds took a long time. Even though its isolation took place somewhere between 1837 and 1864, the recognition of its structures did not come through till 1868.


Quick Summary 

  • Purines and pyrimidines are bases introduction of DNA and RNA. 

  • Purine and pyrimidine have families of Nitrogen bases that make up nucleic acids.

  • Purine has two rings and pyrimidines have one ring. 

  • DNA consists of purines adenine and guanine and pyrimidines cytosine and thymine. 

  • RNA consists of curing adenine and guanine and pyrimidines cytosine and uracil. 

  • Adenine pairs with thymine by two hydrogen bonds. 

  • Guanine pairs with cytosine via three hydrogen bonds. 

  • Purines are bigger and pyrimidines are smaller. 

  • Purine has four nitrogen atoms and pyrimidines have two nitrogen atoms. 

  • The major difference between purines and pyrimidines is their structure. 

  • Bonding between them happens due to the difference in their size structure.

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FAQs on Differences Between Purines and Pyrimidines in DNA and RNA

1. What is the main difference between purines and pyrimidines?

The main difference between purines and pyrimidines is that purines have a double-ring structure while pyrimidines have a single-ring structure.

  • Purines contain two fused nitrogen-containing rings and include adenine (A) and guanine (G).
  • Pyrimidines contain one nitrogen-containing ring and include cytosine (C), thymine (T), and uracil (U).
  • Both are nitrogenous bases that form the building blocks of DNA and RNA.

2. What are purines and pyrimidines in DNA?

In DNA, purines and pyrimidines are nitrogenous bases that pair specifically to form the genetic code.

  • Purines in DNA: adenine (A) and guanine (G).
  • Pyrimidines in DNA: cytosine (C) and thymine (T).
  • A pairs with T, and G pairs with C through hydrogen bonds, maintaining the double-helix structure.

3. How do purines and pyrimidines pair in DNA?

Purines always pair with pyrimidines in DNA to maintain a uniform double-helix width.

  • Adenine (A) pairs with thymine (T) via two hydrogen bonds.
  • Guanine (G) pairs with cytosine (C) via three hydrogen bonds.
  • This complementary base pairing follows Chargaff’s rule.

4. Why do purines pair with pyrimidines and not with each other?

Purines pair with pyrimidines to maintain the constant diameter and stability of the DNA double helix.

  • Pairing two purines would make the helix too wide.
  • Pairing two pyrimidines would make it too narrow.
  • The purine–pyrimidine pairing ensures proper hydrogen bonding and structural stability.

5. What are the examples of purines and pyrimidines?

Examples of purines and pyrimidines include specific nitrogenous bases found in nucleic acids.

  • Purines: adenine (A) and guanine (G).
  • Pyrimidines: cytosine (C), thymine (T) in DNA, and uracil (U) in RNA.
  • These bases are components of nucleotides in DNA and RNA.

6. What is the structural difference between purines and pyrimidines?

The structural difference is that purines have two fused rings, whereas pyrimidines have a single six-membered ring.

  • Purines: one six-membered ring fused to one five-membered ring.
  • Pyrimidines: one six-membered nitrogen-containing ring.
  • This structural variation affects their molecular size and pairing behavior in nucleic acids.

7. Are purines larger than pyrimidines?

Yes, purines are larger than pyrimidines because they contain two nitrogenous rings instead of one.

  • Purines (A and G) have a double-ring structure.
  • Pyrimidines (C, T, U) have a single-ring structure.
  • This size difference is essential for correct base pairing in DNA.

8. What is the function of purines and pyrimidines?

The function of purines and pyrimidines is to store and transmit genetic information as part of DNA and RNA.

  • They form the nitrogenous base component of nucleotides.
  • They participate in complementary base pairing during DNA replication and transcription.
  • Some purine nucleotides like ATP also act as cellular energy molecules.

9. What is the difference between purines and pyrimidines in RNA?

In RNA, purines remain the same as in DNA, but one pyrimidine differs.

  • Purines in RNA: adenine (A) and guanine (G).
  • Pyrimidines in RNA: cytosine (C) and uracil (U).
  • Uracil replaces thymine found in DNA.

10. How can you easily remember purines and pyrimidines?

You can remember purines and pyrimidines using simple mnemonics based on their names and structures.

  • Purines: “Pure As Gold” → Adenine (A) and Guanine (G).
  • Pyrimidines: “CUT the Py” → Cytosine (C), Uracil (U), Thymine (T).
  • Also remember: purines are double-ring, pyrimidines are single-ring.


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